Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., Lipopolysaccharide export system permease protein LptG from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 1e-38
 Identities = 85/350 (24%), Positives = 169/350 (48%), Gaps = 14/350 (4%)

Query: 13  IVATTALVLVTFVGLSGIIKYVEQLRKVGEG---SYDLLQALLFVVLSIPRDVEMFFPMA 69
           ++ + A V + F+ L     +V++L+ +G+    +Y  +QAL++V L IP  +    P+ 
Sbjct: 12  VLKSVAFVTLGFLSLFFFFDFVDELQSIGKPDSLNYGPMQALIYVALLIPSHLYELLPIT 71

Query: 70  ALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKM 129
            L+G++  +  LA SSE  +++ +G        ++L   +  +++   +G++ AP +++ 
Sbjct: 72  VLIGSIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGLSFVVLTFAIGDYVAPTSERT 131

Query: 130 ARDMRAFATSGGAIMSVRTGVWARDANDFI-----FIAKVENEHLYGLNLWRFDENKKLS 184
            + ++A    G   ++  TG W ++    +      +A      L    ++ FD+   + 
Sbjct: 132 GQLLKA-RYQGTYSLAGNTGAWLKEKRGDVSYAVNVLAIDRGGALKSPRIFEFDDKGYIK 190

Query: 185 TVIFSEQVDYVANNEWLMKDAVLTRL-----VNDIEISKESLPEYRWRTSLAPDKLAVVT 239
           T   +       +  W++ D            +   I    +PE  W TSL  + ++V  
Sbjct: 191 TQTLAASARIGGDGHWILTDVDQQHYDTQGAADRAHIVSTKIPELNWPTSLTAEMVSVAL 250

Query: 240 VKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSV 299
           ++P+ +S   L DY+ +L A+ Q + RYE+  WRKV  P+S  VM+++AL F +   R  
Sbjct: 251 LRPDRMSTIDLFDYIRHLDANGQTAQRYEIEFWRKVFYPLSCLVMVVLALPFAYLHFRQA 310

Query: 300 TMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIAL 349
            +   +  GV+ G SF++ +  FG L  +    P   A AP L++  ++L
Sbjct: 311 GITTYVFGGVMIGISFFLLNNVFGYLGNLGNWSPWLTAAAPGLIYSVMSL 360