Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  256 bits (655), Expect = 5e-73
 Identities = 141/351 (40%), Positives = 212/351 (60%), Gaps = 4/351 (1%)

Query: 5   LDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEM 64
           LD YIG++++     VL   +GL+ +  +++++  + + +Y +++A  FV+L+ PR +  
Sbjct: 4   LDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDLSD-TYTVMEAGNFVLLTAPRRLYE 62

Query: 65  FFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAP 124
             PMAAL+G LIGLG+LASSSEL +M+AAG S   I  +V+K  + LM++  L+GE+ AP
Sbjct: 63  MLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEYVAP 122

Query: 125 QAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLY-GLNLWRFDENKKL 183
             +  A+  R+ A  GG   S + G+W R   +++ I  V+ + L  G+  +RFD  +K+
Sbjct: 123 VTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHINAVQPDGLLLGVTRYRFDSERKI 182

Query: 184 STVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPE 243
            T  F+ +  Y  N+ WL+ D   T    D      + PE RW  SL P+ L  V + PE
Sbjct: 183 VTSSFARRAQY-QNDHWLLADVRTTYFRGD-HTEVVNAPEERWDVSLTPELLNTVILAPE 240

Query: 244 ELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGA 303
            LS+TGL DY+HYL     ++SRY LA W KV QP+  A ++LMA+SFIFGPLRSVT+G 
Sbjct: 241 SLSITGLWDYIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPLRSVTLGQ 300

Query: 304 RILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGR 354
           R+ +GV+ GF F I  +  GP S V+G PPL   + P+ +     + LL R
Sbjct: 301 RVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351