Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., LPS export ABC transporter permease LptG from Escherichia coli ECRC62

 Score =  154 bits (388), Expect = 5e-42
 Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 11/348 (3%)

Query: 8   YIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFP 67
           ++G    A   L L T   L      + +L  V  G Y   QA+L V++++PR +    P
Sbjct: 13  FLGFAAAAGLLLPLFTTFNL------INELDDVSPGGYRWTQAVLVVLMTLPRTLVELSP 66

Query: 68  MAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQ 127
             ALLG ++GLG L+ +SEL  +++ GFS   I L  L   I   + +  + EW A   Q
Sbjct: 67  FIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEWVASPLQ 126

Query: 128 KMARDMRAFATSGGAIMSVRTG--VWARDANDFIFIAKV-ENEHLYGLNLWRFDENKKLS 184
           + A  +++ AT+ G    + TG  +W R  N+F+ +  + E     G+ ++ + ++  L 
Sbjct: 127 QQALQIKSTATALGEDDDI-TGNMLWVRRGNEFVTVKSLNEQGQPVGVEIFHYRDDLSLE 185

Query: 185 TVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEE 244
           + I++       +  W++      + +N  E + E+     W+++     L  +++    
Sbjct: 186 SYIYARSATIKDDKTWILHGVNHKKWLNGKE-TLETSDNLAWQSAFTSMDLDELSMPGNT 244

Query: 245 LSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGAR 304
            S+  L+ Y+HYL+ + Q SS Y LALW K+ QPI    M+L+A+ F F   RS  MG+R
Sbjct: 245 FSVRQLNHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSPGMGSR 304

Query: 305 ILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLL 352
           +  GVI G   +IS +    L L++ L     AL   + F+ +AL L+
Sbjct: 305 LAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLV 352