Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 24/359 (6%)

Query: 7   WYIGRTIVATTALVLVTFVGLSGII---KYVEQLRKV-GEGSYDLLQALLFVVLSIPRDV 62
           +++ R ++ T   VL    G+S II    + E  R++ G   Y +  AL    L +P  +
Sbjct: 9   YFLKRYLMTTIWFVL----GVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLIL 64

Query: 63  EMFFPMAALLGALIGLGALASSSELVVMQAAGFSK----LDIGLSVLKTAIPLMIIVTLL 118
           +   P  AL   +  L +L    ELVV +AAG S     L   L  +   I  ++++  +
Sbjct: 65  QQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPI 124

Query: 119 GEWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDAN---DFIFIAK-VENEHLYGLNL 174
             WG  ++  M   +R  A  GG    +    W R ++   D I  AK  E+     L++
Sbjct: 125 AAWGQNKSLAMEAGLRNDA-GGGRQQEIIP--WMRQSSGGKDTIIGAKSFEDNGTMLLDV 181

Query: 175 WRFDENKKLSTVIFSE-QVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPD 233
              D +K  + V   + +   + +  WL+     TR    + + +ES+   +  T+L  +
Sbjct: 182 VLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETR-AGHVPVRQESM---QISTNLRRE 237

Query: 234 KLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIF 293
            +     + E ++   LS  +   K+    S   E      ++ P+ +  M L+A +   
Sbjct: 238 FVQERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSL 297

Query: 294 GPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLL 352
              R     + IL G+++GF  Y+ +           +PP      P +V LA+   +L
Sbjct: 298 KFSRFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATIL 356