Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., HD domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 9/125 (7%)

Query: 171 HSLNVSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLR 230
           HS  V+ +A  I    GL AE ++ +  A   HD+GK+RVP  ++ K TPL +P E  L 
Sbjct: 248 HSEKVAALAAQIAGDMGLDAETVRLVEIAGYLHDLGKLRVPDMVLEKATPL-DPHERVLM 306

Query: 231 LHTKYGIELADNIETFPESAKRVIEQ----HHELRDGSGYPLGLKGDDIDELAQIVAVAN 286
              ++  +  D +  F       I Q    HHE  +G GYP  L    +   A+I+AV++
Sbjct: 307 --KRHAFDTYDVL--FRLFGDNPIAQWAAFHHETLNGEGYPFQLSAQALPLPARIIAVSD 362

Query: 287 AFDNL 291
            F  L
Sbjct: 363 IFQAL 367



 Score = 28.1 bits (61), Expect = 5e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 171 HSLNVSVIAMMIGKARGLPAERIKELAFAALFHDIG 206
           H   V  IA  + +  G   ER +++ FA+  HD G
Sbjct: 39  HGKRVGFIASQVARDLGWDEERRRDILFASFLHDCG 74