Pairwise Alignments

Query, 467 a.a., 3-isopropylmalate dehydratase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  152 bits (383), Expect = 4e-41
 Identities = 136/496 (27%), Positives = 204/496 (41%), Gaps = 81/496 (16%)

Query: 3   KAKTLYEKIYDAH-----VVVAAP--GETPILYIDRHLVHEVTSPQAFDGLREK-GRP-- 52
           + +TL+EKI   H     V  AAP  G+   +  D   +HE  +  A   L    GRP  
Sbjct: 198 RPRTLFEKIVGRHGLATPVTPAAPVVGDGAFVRADWRFIHEYYTGMAAHMLHGTFGRPLE 257

Query: 53  VRQVSKTFATMDHNVSTTTKDINASGEMA-RIQMQTLSKNCEEFGVTL------------ 99
           +R+ +      DH         +  G +   +Q    ++     G  L            
Sbjct: 258 IREPATVIVFEDHTSYVQESPAHVRGGLVPNVQRMVEAQRAFAAGYGLRTHRTLTEAEAA 317

Query: 100 YDINHKYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQT 159
            D      GI H M  E    LPG  +V  DSHT   GA G +AFG+GT+++ +   T  
Sbjct: 318 LDDGSNVAGISHAMMTE-HYALPGQLVVGTDSHTPHSGALGCVAFGVGTTDMANAFVTGA 376

Query: 160 LKQGRAKTMKIEVRGKVAPGITAKDIVLAIIGKTT--AAGGTGYVVEFCGEAIRDLSMEG 217
           ++     +++I + G + PG+TAKDI L ++ +    A  G G V EF G  +  LS + 
Sbjct: 377 VRMTVPPSLRIVLDGALPPGVTAKDIALNLLARPAIRAGSGVGKVFEFTGPVVEKLSTDE 436

Query: 218 RMTVCNMAIELGAKAGLIAPDATTFNYIKGRKFAPQGSDWDAAVDYWQTLKTDEDAQFDA 277
           R T+ NM  ELG   G++APDA T  +++ R+        +  ++ W  +++D DA +  
Sbjct: 437 RATLTNMTAELGGFTGIVAPDAETVRFLRERRGV------EFVLEDW--MRSDPDAVYAE 488

Query: 278 VVTLEASEIKPQVTWGTNPGQVIAVDEPIPSPSQFADPVERSSAEKALAYMGLEAGKMLS 337
            + L+ S +   V    +PG                               GL   ++  
Sbjct: 489 TIHLDCSTVGAMVASPGDPGN------------------------------GLPLSQVKE 518

Query: 338 DYKVDKVFVGSCTNSRIEDMR-----AAAAVAKGKKVASHVQALIVPGSEQVKAQAEAEG 392
             ++D  + GSCT  + ED          A  +G +VA  V+  +  G+  V+ Q  A G
Sbjct: 519 SVRIDIAYGGSCTAGKREDFDHYHEVLRWAADRGMRVAPGVELFLQFGTTAVRDQCVAAG 578

Query: 393 LDKIFIEAGFEWRLPGCSMCLAMNNDRLGPG------ERCASTSNRNFEGRQGRDGRTHL 446
               F   G     P C  C        GPG      +   S  NRNF GR G  G   L
Sbjct: 579 YLDAFERVGARILQPSCGAC-----GNCGPGGSARAEQVTVSAINRNFPGR-GGPGSVWL 632

Query: 447 VSPAMAAAAAIAGHFV 462
            SP   AA+AIAG  +
Sbjct: 633 ASPPTVAASAIAGELL 648