Pairwise Alignments

Query, 467 a.a., 3-isopropylmalate dehydratase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., 3-isopropylmalate dehydratase large subunit from Pseudomonas sp. DMC3

 Score =  589 bits (1519), Expect = e-173
 Identities = 287/467 (61%), Positives = 366/467 (78%), Gaps = 5/467 (1%)

Query: 5   KTLYEKIYDAHVVVAAPGETPILYIDRHLVHEVTSPQAFDGLREKGRPVRQVSKTFATMD 64
           KTLY+K++D+H+V      + ++YIDRH++HEVTSPQAF+GLR  GR   ++    AT D
Sbjct: 4   KTLYDKLWDSHLVKQRDDGSALIYIDRHIIHEVTSPQAFEGLRLAGRKPWRIDANIATPD 63

Query: 65  HNVSTTTK---DINA-SGEMARIQMQTLSKNCEEFGVTLYDINHKYQGIVHVMGPELGIT 120
           HNV TT +    I A + +++R+Q+QTL  NC+E+G+  + +N   QGIVHV+ PE G T
Sbjct: 64  HNVPTTPERKGGIEAIADQVSRLQVQTLDDNCDEYGIVEFKMNDVRQGIVHVISPEQGAT 123

Query: 121 LPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQGRAKTMKIEVRGKVAPGI 180
           LPGMT+VCGDSHT+THGAFG+LA GIGTSEVEHVLATQ L   + K M + V G++  G+
Sbjct: 124 LPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMLVRVEGQLPFGV 183

Query: 181 TAKDIVLAIIGKTTAAGGTGYVVEFCGEAIRDLSMEGRMTVCNMAIELGAKAGLIAPDAT 240
           TAKDIVLA+IGK   AGG G+ +EF G AIRDLS+EGRMT+CNM+IE GA+ GL+A D  
Sbjct: 184 TAKDIVLAVIGKIGTAGGNGHAIEFAGSAIRDLSVEGRMTICNMSIEAGARVGLVAADQK 243

Query: 241 TFNYIKGRKFAPQGSDWDAAVDYWQTLKTDEDAQFDAVVTLEASEIKPQVTWGTNPGQVI 300
           T +Y+KGR FAP+G  WD AV+ W+ L +D DA+FD VV L+A++IKPQV+WGT+P  V+
Sbjct: 244 TIDYVKGRPFAPKGEQWDMAVEAWKDLVSDADAKFDTVVELDAAQIKPQVSWGTSPEMVL 303

Query: 301 AVDEPIPSPSQFADPVERSSAEKALAYMGLEAGKMLSDYKVDKVFVGSCTNSRIEDMRAA 360
           AVD+ +P P++  D V+R S  +AL YMGL A + ++D ++D+VF+GSCTNSRIED+RAA
Sbjct: 304 AVDQNVPDPAKEMDLVKRDSIVRALKYMGLTANQAITDIQLDRVFIGSCTNSRIEDLRAA 363

Query: 361 AAVAKGKKVASHV-QALIVPGSEQVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDR 419
           A +AKG+KVAS + QA++VPGS  VKAQAEAEGLDKIF+EAGFEWR PGCSMCLAMN DR
Sbjct: 364 AVIAKGRKVASTIKQAIVVPGSGLVKAQAEAEGLDKIFLEAGFEWREPGCSMCLAMNPDR 423

Query: 420 LGPGERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIAGHFVDIRQ 466
           L  GE CASTSNRNFEGRQG  GRTHLVSPAMAAAAA+ G F+D+R+
Sbjct: 424 LESGEHCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAVNGRFIDVRE 470