Pairwise Alignments

Query, 363 a.a., 3-isopropylmalate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., D-malate dehydrogenase [decarboxylating] from Xanthobacter sp. DMC5

 Score =  193 bits (491), Expect = 5e-54
 Identities = 136/355 (38%), Positives = 186/355 (52%), Gaps = 15/355 (4%)

Query: 1   MTDRDYKIAVLPGDGIGPEVMAQAHKVLDAIEQKHGIRFSREEHDVGGIAI-DNHGCPLP 59
           M  R Y+IAV+PGDGIG EVM +  +VL+     +G       HD         HG  +P
Sbjct: 1   MAGRHYRIAVIPGDGIGKEVMPEGVRVLEKAAALYGFSLDLNWHDFACCDYYARHGEMMP 60

Query: 60  ESTLRACEEADAVLFGSVGGPKWEHLPPNEQPERGALLPLRKHFQLFCNLRPAQIHQGLE 119
                    +DA+LFG+VG   W    P+     G+LL  R+ F  + NLRP ++  G+ 
Sbjct: 61  ADWKERVGTSDAILFGAVG---WPDTVPDHVSLWGSLLQFRREFDQYVNLRPVRLMPGVP 117

Query: 120 AFSPLRADISARGFDIVVVRELTGGIYFGQPKGREGEGAHEKAFDTEVYHRFEIERIARI 179
             SPL         D  VVRE T G Y           + E      V  R  ++R+ + 
Sbjct: 118 --SPL-VGRKPGDIDFWVVRENTEGEYTSIGGRMYPGTSRELVIQETVMSRHGVDRVLKF 174

Query: 180 AFESARLR-RKKVCSIDKANVLQSSI-LWREVVSEIAKEYPDVSLSHMYIDNATMQLIKD 237
           AFE A  R  + + S  K+N +  ++  W E V  +A  YP+V     +ID  T Q +  
Sbjct: 175 AFELAMRRPNRHLTSATKSNGIAITMPYWDERVEAMAASYPEVRTDKYHIDILTAQFVLH 234

Query: 238 PAQFDVMLCSNIFGDILSDECAMITGSMGMLPSASMNESKF--GLYEPAGGSAPDIAGKN 295
           P +FDV++ SN+FGDILSD     TG++G+ PS ++N  +    L+EP  GSAPDIAGK 
Sbjct: 235 PDRFDVVVASNLFGDILSDLGPACTGTIGIAPSGNINPDRTFPSLFEPVHGSAPDIAGKG 294

Query: 296 IANPVAQILSAALMLRYSLGEEAAARDIENAVSQALA--AGELTADLAGSKPALS 348
           +ANPV QI SAA+ML + LGE  AA  IE A+ + LA  AG  TAD+ G+   LS
Sbjct: 295 VANPVGQIWSAAMMLEH-LGEMDAAAAIERAIERVLAEPAGR-TADIGGTANTLS 347