Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Pseudomonas simiae WCS417

 Score =  211 bits (538), Expect = 5e-59
 Identities = 168/576 (29%), Positives = 258/576 (44%), Gaps = 71/576 (12%)

Query: 30  NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
           +G+ Q++ W   G Q    +  L A+ +     IA+ S N   W IAD A      V+VP
Sbjct: 31  DGEVQSLTWGDVGHQARCAANWLRARELPQGSHIALISKNCAHWIIADLAIWMAGHVSVP 90

Query: 90  IYPTNTPEQAAYILQNADVKVVFVGEQAQFDA-ALSQFEQCPELRLIVAMNANIDLKQAS 148
           +YP  T +  A++L +++  +V +G+   + A A    +  P + L +  +   D     
Sbjct: 91  LYPNLTADSVAHVLTHSEAALVLIGKLDDWPAMAPGVPKDVPTISLPLCPSGEFDFS--- 147

Query: 149 CAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLE 208
               W +  A S  QD     A        DL T+IYTSGTTG PKGVM  +  +G    
Sbjct: 148 ----WADLQASSPIQDDPAPAA-------SDLATIIYTSGTTGLPKGVMHSFGALGFAAT 196

Query: 209 GHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-LYKGATNCYLQDVAHVREALAEVRPTV 267
                  L + D  L +LPL HV ER +     +Y G T  + + +      L   RPT 
Sbjct: 197 RGTALFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVFFAESLETFLVDLRRARPTA 256

Query: 268 MCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLKQSHQF 327
           +  VPR + K    ++ KV             A  + A +       R P    +  H+ 
Sbjct: 257 LFGVPRIWTKFQMGVYAKVP------------AKRLDALL-------RLPFIGKRVGHKV 297

Query: 328 ADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDD 387
              L L  LR  L G         A + E + R++  +G++V   YGMTE     SC   
Sbjct: 298 LAGLGLDALRIALSG--------AAPVPEALLRWYRRLGLDVLEVYGMTE-----SCGYS 344

Query: 388 HCFNPDS-----IGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETTESFDEQGFLKT 442
           H   P       IGL  PG +V+I    E+ VR    M GYYK  ++T E+    GFL+T
Sbjct: 345 HVCRPGQQTLGWIGLPCPGVEVRIDPAGEVQVRSGATMLGYYKDPQKTAETITADGFLRT 404

Query: 443 GDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSA 502
           GD G  D  G L +T R+KE+ KTS GKY+AP  IE  + +   IEQ+ V+ D    +SA
Sbjct: 405 GDKGEQDTEGRLRLTGRLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGDG---LSA 461

Query: 503 LIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
            I  C  S  E   +                +    E+ + ++ + L K E++++  ++ 
Sbjct: 462 PIGLCVLSAVEQDPQ---------------ALRSSLERWLVQVNQTLDKHERLRQLVVVK 506

Query: 563 KAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQDS 598
            ++++++G LTPT K++R  I   Y +  +   + S
Sbjct: 507 DSWAVENGFLTPTLKIKRNAIESTYGEYFQRWSERS 542