Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  118 bits (296), Expect = 6e-31
 Identities = 126/505 (24%), Positives = 209/505 (41%), Gaps = 102/505 (20%)

Query: 34  QAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPT 93
           + +++  F EQ + L+ AL A G+   D++ +   N P+  IA FA L+  AV VP+ P 
Sbjct: 47  RVLSYRDFAEQAERLAGALHALGVKRGDRVILDMQNCPQLVIAHFAILRANAVVVPVNPM 106

Query: 94  NTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRL---IV-----AMNANIDLK 145
           N  E+  + + + D KV  +      + A +     PE RL   IV     A +A++   
Sbjct: 107 NRAEELKHYITDPDAKVAIITGDLAAELAKASDALPPEQRLSHMIVTQFTDAFDADVSGD 166

Query: 146 QASCAMHWDEFVAQSHH-------QDRAPLDALIEQ-------ANYDDLFTLIYTSGTTG 191
            A  A  W E++   H        Q  A  DAL             +D+  L YTSGTTG
Sbjct: 167 DAP-APAWKEWLTTRHPLPALAGGQVMAWTDALAANHPAPAHVVGANDMALLPYTSGTTG 225

Query: 192 TPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQ 251
            PKG                            C    S +   A     L+ G+T+    
Sbjct: 226 LPKG----------------------------CVHHHSSLMHNAMAGQ-LWGGSTS---- 252

Query: 252 DVAHVREALAEVRPTVMCAVPRFY-EKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVC 310
                          V+  VP F+   + S +H  V+ A  +  ++  W  ++  ++   
Sbjct: 253 ------------EAVVLAVVPMFHITGVVSMMHTAVLAAATLI-IMPRWDRDVAGRLI-- 297

Query: 311 RQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIG-RFFHAIGINV 369
             + +  +W    +    D +      +     +N++  GGA + + +  R     G+  
Sbjct: 298 -SRWKVTAWTNIPT-MVIDLMASPNFASYDLSSMNYIGGGGAAMPQAVAQRLLEQYGLKY 355

Query: 370 KLGYGMTETTAT-----------------VSCWDDHCFNPDSIGLSMPGAQVKIGENNEI 412
           + GYG+TET A                      D    +PD++      A++ IGE+ EI
Sbjct: 356 QEGYGLTETAAPSHTNPSDHPKQQCLGIPFMSTDARVVDPDTL------AEMPIGESGEI 409

Query: 413 LVRGPMVMRGYYKLDKETTESFDE---QGFLKTGDAGHIDENGNLFITDRIKELMKTSGG 469
           ++ GP V +GY+K    T  +F E   + F ++GD G +DE G  FITDR+K ++  SG 
Sbjct: 410 IIHGPEVFQGYWKRPDATAAAFVEFEGKRFFRSGDMGRMDEEGYFFITDRLKRMINASGF 469

Query: 470 KYIAPQVIEGAIGKDHFIEQIAVIA 494
           K + P  +E  + +   I++  VI+
Sbjct: 470 K-VWPAEVELLMFRHPAIQEACVIS 493