Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  103 bits (258), Expect = 2e-26
 Identities = 137/584 (23%), Positives = 221/584 (37%), Gaps = 127/584 (21%)

Query: 34  QAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPT 93
           Q I + Q G  ++  +  L   G+     + ++  N P + IA FA L+     V   P 
Sbjct: 57  QVITYRQLGAAVERAAKGLQDLGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPL 116

Query: 94  NTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVA-----MNANIDLKQAS 148
           +     A+ ++++   ++   +       +++      LR +V        A  D  QA 
Sbjct: 117 DAERVLAHKIEDSRTDILITLDLVNLYPQMARLLDSSRLRKLVVGSLGDYGAAGDKVQAQ 176

Query: 149 CA---------------MHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTP 193
                               D   ++  HQ   PL  L E+     +  L YT GTTG P
Sbjct: 177 LQGAGQIAPVPTDDRHLRFTDLLKSEGTHQTH-PLGDLTEE-----IVVLQYTGGTTGLP 230

Query: 194 KGVMLDYRNIGA-------QLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGAT 246
           KG ML + N+ +         +G    L+   E   L  LPL H+F  +    +  +   
Sbjct: 231 KGAMLTHANLTSASAQYYESTKGDPPILDEGSERF-LVVLPLFHIFALSAAMLLGVRLGA 289

Query: 247 NCYLQ---DVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNM 303
              L    DV  V   LA  R +V   VP  Y  I S                       
Sbjct: 290 ALVLHTRFDVDAVMNELAASRISVFPGVPTMYTAILS----------------------- 326

Query: 304 GAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLD-ETIGRFF 362
                                H  A ++ L  L+        F   GGA L  E   RFF
Sbjct: 327 ---------------------HPKAKEMDLRSLK--------FCGSGGAPLPVEVEQRFF 357

Query: 363 HAIGINVKLGYGMTETTATVSCWDDHCFNP-------DSIGLSMPGAQVKI--------- 406
              G ++  G+GMTET+   +      F P        S G+ +P  ++K+         
Sbjct: 358 ALTGCHLNEGWGMTETSPVGT------FTPARGVRKAGSCGMPLPQVRIKLVSLDDPSKD 411

Query: 407 ----GENNEILVRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKE 462
               GE  E+ ++GP VM+GY+   K T ES    G+ ++GD   +D +G  +I DR K+
Sbjct: 412 VTAFGEAGELCIKGPNVMKGYWNNPKATAESMTPDGYFRSGDVAKMDADGYFYIVDRTKD 471

Query: 463 LMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN--- 519
           ++   GG  + P+V+E A+ +   + ++ VI    ++        F  L+E A EL    
Sbjct: 472 ML-LCGGYNVYPRVLEEAVYEHPAVAEVCVIGIPDEY-RGQSPKAFVKLKEGAGELTLDA 529

Query: 520 IKYHDRLELIKHSQV------LEMFEKRVNELQKELAKFEQVKK 557
           +K   +  L KH  +       E+ +  V +L K+    E+ +K
Sbjct: 530 LKAFLKDRLGKHEMIGALEIRAELPKTAVGKLSKKDLVDEEARK 573