Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  294 bits (752), Expect = 8e-84
 Identities = 184/593 (31%), Positives = 306/593 (51%), Gaps = 16/593 (2%)

Query: 17  AQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIA 76
           A+  D  AL+ K+ G WQ I+W  + +Q     + LL  G+     +A+ S N   W  A
Sbjct: 27  ARRPDAVALRQKEYGVWQPISWSAYAQQARWFGLGLLRLGLRPGQAVAVLSENRKEWVFA 86

Query: 77  DFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIV 136
              A  +R VT  +YPT+  E+  ++L  +D  V+   +Q Q D  LS  ++ P L  IV
Sbjct: 87  QLGAALVRGVTAGVYPTSPAEEIEHLLALSDAPVIVCEDQEQLDKVLSIRDRLPHLHTIV 146

Query: 137 AMNAN-IDLKQASCAMHWDEFVAQSHH---QDRAPLDALIEQANYDDLFTLIYTSGTTGT 192
            +++  +     +  + +DE VA        + A   A       DD+  +++TSG+TG 
Sbjct: 147 LIDSRGLRRYDRTGMIDFDEVVALGRRFEADEPAAAAAATVGPALDDIGLIVFTSGSTGR 206

Query: 193 PKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-LYKGATNCYLQ 251
           PK  M+ +R +G    G +  L   + D  + +LPL H+ E+ ++ ++ +  GA   + +
Sbjct: 207 PKAAMMSWRGLGTAARGLNSVLGCREGDSLVSYLPLCHMGEQMFSLHIPVAFGAVVNFAE 266

Query: 252 DVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCR 311
            +  V++ L E+ P +   VPR +EK  +AI  K+ +A  +R  L+  A+   A  A   
Sbjct: 267 SLRTVQDDLRELSPRIFFGVPRIWEKFHAAIQNKLREAGGLRLWLYERAMRSLAHDAGVP 326

Query: 312 QQQRQPSWMLKQSHQFADKLVLSKLRALLGGR-INFMPCGGAKLDETIGRFFHAIGINVK 370
           + Q   SW+ +        L+L  L   LG R         A +   + RFF  +G+ ++
Sbjct: 327 RAQW--SWLQRARWAVWYVLILRSLLNYLGLRGCRVAVSAAAPIAPEVLRFFRVLGVPIR 384

Query: 371 LGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKET 430
             YGMTE +   +          ++G+  PG +V++ ++ EIL+RG +V RGY K D+ T
Sbjct: 385 EAYGMTEASGATTMQPGDDSPVGTVGVPYPGVEVQLADDGEILIRGEVVFRGYLKNDEAT 444

Query: 431 TESFDEQGFLKTGDAGHIDENGN--------LFITDRIKELMKTSGGKYIAPQVIEGAIG 482
            E+ D +G+L TGD G  +++ +        L I DR K++M T+GGK I P  IE A+ 
Sbjct: 445 REAIDAEGWLHTGDIGRWEDSPSKNAPAGRELRIVDRKKDIMITAGGKNITPSEIENAMR 504

Query: 483 KDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRV 542
              FI++   IAD R FVSALI   F+++ ++++E  + Y     L++  QV E+ ++ V
Sbjct: 505 FSPFIKEAVAIADRRHFVSALIQIDFETVSKWSEEKGLVYTTFRSLVELPQVRELVQREV 564

Query: 543 NELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
           +     + + +QV+KF LL K    D GE+T T K+RRK + ++Y   IEE+Y
Sbjct: 565 DTANARMPQVQQVRKFHLLTKELDHDDGEVTATMKVRRKAVFEKYAQVIEEIY 617