Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  104 bits (259), Expect = 1e-26
 Identities = 128/526 (24%), Positives = 216/526 (41%), Gaps = 100/526 (19%)

Query: 41  FGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAA 100
           F +++  L   L   G+   D++ + S N  R+    F       V  P+     P++ A
Sbjct: 32  FTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRWNPKEVA 91

Query: 101 YILQNADVKVVFVGEQ-AQFDAALSQFEQCPELRLIVAMNANIDLKQASCAMHWDEFVAQ 159
           Y L + D +++ V +  A   A L        LR +V      D       + ++  +A 
Sbjct: 92  YSLDDCDTRILLVDDVFAPMAAELRGLSS--SLRTVVYCG---DGAVPEGMVGYEALLAA 146

Query: 160 SHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNL-TQ 218
           +   + AP D+       D+L  ++YT GTTG PKGVML + ++     G    L   TQ
Sbjct: 147 TDPAEDAPHDS-------DELAAVMYTGGTTGQPKGVMLTHGSLCINALGTVAALPRDTQ 199

Query: 219 EDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKI 278
           +  ++   P+ HV        V  +         V  V + LA +R      +   +  +
Sbjct: 200 DAAAIVAAPMFHVAGCG----VALQSLMRLVPVHVVPVFDELAVLRTLQSARITEMF--L 253

Query: 279 FSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRA 338
              + ++V++ P                                   +FA+   LS LR 
Sbjct: 254 VPTMIKRVIEHP-----------------------------------RFAE-FDLSSLRL 277

Query: 339 LLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPD----- 393
           L  G     P   A LD+ +  F       V   YGMTE +  V+    HC  P      
Sbjct: 278 LSYGAA---PIDAALLDQAMRAFPGTAFAQV---YGMTELSPVVTALPSHCHAPGPDRER 331

Query: 394 ---SIGLSMPGAQVKI----------GENNEILVRGPMVMRGYYKLDKETTESFDEQGFL 440
              S G  +P A+++I          G+  EI+ RGPMVM+GY+   KET E+    G++
Sbjct: 332 LLRSAGTPIPIAELRIVDGDDNEVPFGQVGEIVARGPMVMKGYWNKPKET-EAALRGGWM 390

Query: 441 KTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGK--------------DHF 486
            TGD G++DE G +F+ DR+K+++  SGG+ +    +E AI +              D +
Sbjct: 391 HTGDGGYMDEEGFVFVVDRMKDMI-VSGGENVYSAEVENAIAQLPQVLMSAVIGVPDDKW 449

Query: 487 IEQIAVIADTRKFVS----ALIVPCFDSLEEYAKELNIKYHDRLEL 528
            E++  +   R+ ++    A+I  C + +  Y    ++++ D L L
Sbjct: 450 GERVHAVIVRREGMALEAEAVIAHCREQIAGYKCPRSVEFRDALPL 495