Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (520), Expect = 6e-57
 Identities = 157/571 (27%), Positives = 259/571 (45%), Gaps = 64/571 (11%)

Query: 25  LKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIR 84
           LK   N Q+    + +  ++   L  AL A G    DK+A+ S N   W I D A +   
Sbjct: 36  LKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGD 95

Query: 85  AVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDL 144
            ++VPI+PT   E   Y L++++ K++ VG+     A      + P L  I     +   
Sbjct: 96  YISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPS--- 152

Query: 145 KQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDD-LFTLIYTSGTTGTPKGVMLDYRNI 203
             A C   +   + Q    +  P        ++D+ L +++YTSGT+G PKG ML Y   
Sbjct: 153 -AAKCQYEFQTLIKQHQPSEERP-------THFDEKLMSIVYTSGTSGQPKGAMLTYGAF 204

Query: 204 GAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWT-AYVLYKGATNCYLQDVAHVREALAE 262
               +     + + + D    +LPL+H+ ER +     +  G    + + +    E +  
Sbjct: 205 TWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKM 264

Query: 263 VRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLK 322
            RPT+  +VPR +      I +K+                           Q++ + +LK
Sbjct: 265 HRPTLFISVPRLWTLFQQRIQDKL--------------------------PQKKLNILLK 298

Query: 323 QSHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTAT 381
               F + L+  KL   LG  +   + CG A +   +  ++ ++G+N+   +GMTE+ A 
Sbjct: 299 --IPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAY 356

Query: 382 VSCWDDHCFNPDSIGL---SMPGAQVKIGENNEILVRGPMVMRGYYKLDKETTESFDEQG 438
            +   ++ F  D IG    + PG ++KI E+ EILVR   +  GYYK D  T ESF++ G
Sbjct: 357 STL--NYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDG 414

Query: 439 FLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRK 498
           +L TGD G +D  G L I  R K+  KT+ GK++AP  IE  + +   +E + +I     
Sbjct: 415 WLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLP 474

Query: 499 FVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKF 558
               L VP            N  + DR    + +Q      K +  +  EL   EQ+K  
Sbjct: 475 APILLAVP-----------HNFPHFDRARYERTTQ------KVIARINSELESHEQIKGV 517

Query: 559 RLLPKAFSMDSGELTPTQKLRRKVINDRYQD 589
            ++   +S+D+G LTPT K++R V+  +Y D
Sbjct: 518 LMIKDPWSIDNGILTPTLKIKRHVLEKKYHD 548