Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  273 bits (697), Expect = 2e-77
 Identities = 185/595 (31%), Positives = 294/595 (49%), Gaps = 17/595 (2%)

Query: 7   HIVKRIRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIF 66
           ++V     R  + GD   L  K  G WQ+++W +   Q+  ++  L A+G+   D + + 
Sbjct: 9   NLVTMFFARAKEKGDAPFLWRKTQGTWQSLSWAEVARQVAAMAAGLKAEGLKPGDPVMLV 68

Query: 67  SNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQF 126
           S N P + IAD A +    +TVP Y TNT     +IL ++  + V V   A+    L   
Sbjct: 69  SENRPEFCIADLAIMAAGCITVPTYTTNTTRDHQHILTDSGARAVIV-STAKLATTLMPA 127

Query: 127 EQCPELRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYT 186
               ++ L++ M      +       W + +A   H       AL + A   D   +IYT
Sbjct: 128 VLRSQVSLVIPMEPIRGAQGNYTCRLWSDLIAA--HPADVDACALAQTAARSDQACIIYT 185

Query: 187 SGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT---QEDVSLCFLPLSHVFERAWTAYV-LY 242
           SGT G P+GVM  +  I A +EG  Q +       ++V L FLPLSH +E +   ++ + 
Sbjct: 186 SGTGGAPRGVMQHHGAILANVEGAGQVVLEDFGWGDEVFLSFLPLSHAYEHSGGQFLPML 245

Query: 243 KGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVN 302
            G    Y + +  +   + E RPT+M  VPR +E + + I + + K       L   A+ 
Sbjct: 246 LGGQIYYAEGLEKLASNIEEARPTIMVVVPRLFEVLRTRIIKSIEKQGKFPTYLLNQALR 305

Query: 303 MGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFF 362
           + AK     +QQ + S +         + +  K+RA  GGR+  +  GGA L+  +G FF
Sbjct: 306 IAAK-----EQQGKSSIVDLPMKALLSRTLTPKIRARFGGRMKALVSGGAPLNPDVGLFF 360

Query: 363 HAIGINVKLGYGMTETTATVSCWDDHC-FNPDSIGLSMPGAQVKIGENNEILVRGPMVMR 421
            A+G+ +  GYG TE    +SC         D++G  + G +VKI E+ EILVRG +VM 
Sbjct: 361 EAMGLMLLQGYGQTEAGPVISCNRPAAGIAMDTVGPPLDGVEVKIAEDGEILVRGELVMH 420

Query: 422 GYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAI 481
           GY++   E TE   + G+L TGD G ID+ G + ITDR K+L+    G  ++PQ +EG +
Sbjct: 421 GYWRNPAE-TEKVLKDGWLHTGDIGEIDDRGRIRITDRKKDLIVNDKGDNVSPQKVEGML 479

Query: 482 GKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKR 541
                I Q  V  D R  +  L+VP  +   E+A           +   +   L     R
Sbjct: 480 TLQPEIGQAMVYGDRRPHLVGLLVPDSEWTMEWAAANGRPIKGITDDPTYLAALRAAVDR 539

Query: 542 VNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQ 596
           VN+   +L+  E+V++F L  + F++++ ELTP+ K+RR VI  RYQD ++ +Y+
Sbjct: 540 VND---DLSVIERVRRFILADEPFAIENEELTPSMKIRRHVIRKRYQDRLDALYK 591