Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 5e-29
 Identities = 129/511 (25%), Positives = 198/511 (38%), Gaps = 101/511 (19%)

Query: 38  WHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPE 97
           W Q  + +D+ + AL+A G+   D++ I++ N   W I  FA+ ++ A+ V I P     
Sbjct: 48  WRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRSS 107

Query: 98  QAAYILQNADVKVVFVGE---QAQFDAALSQF--------------EQCPELRLIVAMNA 140
           +  Y L  +  + V   +    + + A L                 E+ PELR +V    
Sbjct: 108 ELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRGVV---- 163

Query: 141 NIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDY 200
           ++ L      + W    A++       L A   Q   DD   + YTSGTTG PKG  L +
Sbjct: 164 SLALSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSH 223

Query: 201 RNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAY-VLYKGATNCYLQD----VAH 255
            NI        + L LT+ D  +  +PL H F         +  G+   Y  D    +A 
Sbjct: 224 SNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLAT 283

Query: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQR 315
           +R A+A+ + T +  VP  +                                        
Sbjct: 284 LR-AVAQEKATALYGVPTMF---------------------------------------- 302

Query: 316 QPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
               + +  H    +  LS LR    G +    C    +   IG    A    V++ YGM
Sbjct: 303 ----IAELDHPQRGEFDLSSLRT---GIMAGATCPIEVMRRVIGEMHMA---EVQIAYGM 352

Query: 376 TETTAT---VSCWDDHCFNPDSIGLSMPGAQVKI----------GENNEILVRGPMVMRG 422
           TET+         DD      S+G + P  + K+          GE  E+  RG  VM G
Sbjct: 353 TETSPVSLQTGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLG 412

Query: 423 YYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIG 482
           Y+   K T ES D +G++ TGD   +DE G + I  R K+++   GG+ I P+ +E    
Sbjct: 413 YWNNPKATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMI-IRGGENIYPRELE---- 467

Query: 483 KDHFIEQIAVIADTRKFVSALIVPCFDSLEE 513
              F      +AD    V  + VPC    EE
Sbjct: 468 --EFFFTHPAVAD----VQVIGVPCSKYGEE 492