Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  258 bits (659), Expect = 5e-73
 Identities = 182/609 (29%), Positives = 285/609 (46%), Gaps = 27/609 (4%)

Query: 12  IRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMP 71
           +R +  + G   AL+ K +G WQ   W ++ +    ++  L   G+   D+I I   ++P
Sbjct: 5   LRLQAQERGAQVALREKIHGIWQGRTWLEYYQTARRVAHGLTKLGLQRGDRIVIAGEDVP 64

Query: 72  RWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPE 131
            W  AD  A  I    V IYPTN   +  YI  +   K+   G+Q Q D  L    + P 
Sbjct: 65  EWFYADLGAQMIGVQVVGIYPTNPWAEVQYIAGHCQAKLAVTGDQEQTDKVLDAMREGPG 124

Query: 132 LRLIVAMNANIDLK--------QASCAMHW----DEFVAQSHHQDRAPLDALIEQANYDD 179
           L  +  +   +D+K        +     H     D+ VA+    ++  LD  I+    DD
Sbjct: 125 LPHLEHIFC-VDMKGLRRYEPGRPHAFQHLLDLGDQLVAEDPLAEQR-LDGQIDALVPDD 182

Query: 180 LFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDV-SLCFLPLSHVFERAW-T 237
           +  L+YTSGTTG PKG ML +RN       +     +T +   S+C+LPL HV ER + T
Sbjct: 183 VNILVYTSGTTGPPKGAMLTHRNFVYGAYAYMVARQMTGKPFESVCYLPLCHVAERTYST 242

Query: 238 AYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLF 297
              L  G T  + + +  V   + E+ PT    VPR +EK+      ++  +   ++   
Sbjct: 243 VQHLISGGTINFAESIDTVATNIREIGPTFFLGVPRIWEKLQQGFEFRMKDSGRAQR--- 299

Query: 298 TWAVNMGAKMAVCRQQQRQPSWMLKQ-----SHQFADKLVLSKLRALLG-GRINFMPCGG 351
            W   +G K       +R     LK         F   L+   ++  +G  R +   CGG
Sbjct: 300 -WLYRLGMKRGRALSDRRAEHGHLKSLGDRLEFGFWYLLLFRNMQRHMGLNRTHTRMCGG 358

Query: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCW-DDHCFNPDSIGLSMPGAQVKIGENN 410
           A +     +FF  IG+ V  GYG+TE             F   S G +M G + ++  + 
Sbjct: 359 ASVSPETLKFFDIIGLPVGQGYGLTEAGGLAFVQVPGRPFIRGSCGPAMEGVEWRVEADG 418

Query: 411 EILVRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGK 470
           E+ VR P V  GY   DK T +     G++ TGD       G + + DR K ++ TSGGK
Sbjct: 419 EVFVRSPGVFTGYLFDDKGTKDILSADGWIATGDIVEKHGEGEIVVVDRKKAIIITSGGK 478

Query: 471 YIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIK 530
            IAP  IE AI    F+ +  V+ + +KF+  L+   FD++  +A E +++Y     L  
Sbjct: 479 NIAPSEIENAIKDSPFVREAIVVGEGKKFLGGLVQIDFDTVGRWAAERDLQYTTYKSLTL 538

Query: 531 HSQVLEMFEKRVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDE 590
             +V+E+ +  V+E+    A+ E V+KF LL K    D GELT TQK+RR +IN ++  E
Sbjct: 539 LPEVIELVQGVVDEVNSRFARVENVRKFVLLEKELDHDDGELTATQKVRRGLINKKFARE 598

Query: 591 IEEMYQDSP 599
           ++ +Y  +P
Sbjct: 599 LDIIYGSAP 607