Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  311 bits (798), Expect = 4e-89
 Identities = 183/587 (31%), Positives = 306/587 (52%), Gaps = 7/587 (1%)

Query: 16  IAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTI 75
           + + G    ++ K  G W++  W Q G  + E++  L+A G   ++  +I SN    W +
Sbjct: 31  VKERGPAIWMRQKDFGIWRSWTWDQTGTAVREIAHGLMALGFEARETASILSNTTVEWVL 90

Query: 76  ADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLI 135
            D A L    V   IYPT+  EQ  Y+  ++   V+FV +  Q D AL      P L+ I
Sbjct: 91  CDLAVLSAGGVANGIYPTDAAEQVQYLCDDSATTVLFVEDDEQLDKALEVRAHLPRLKKI 150

Query: 136 VAMNA----NIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTG 191
           V ++     ++   Q        E       Q    ++  +     +DL  L+YTSGTTG
Sbjct: 151 VVVDMEGLRDLHDPQVISLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAILVYTSGTTG 210

Query: 192 TPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-LYKGATNCYL 250
            PKG M  ++ +   + G++  +   + D  +CFLPL H+ ER    Y  LY GA   ++
Sbjct: 211 RPKGAMHSHQGLVYTVRGYNTLIARDENDECMCFLPLCHIAERMGGEYFSLYTGAKLNFV 270

Query: 251 QDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVC 310
           ++   V E + E+ PTV  AVPR +EK +S +   + +A  +++  + WA+ +G K+A  
Sbjct: 271 ENPETVPENVREIAPTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAIGVGQKVADR 330

Query: 311 RQQQRQPSWMLKQSHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINV 369
               +     L+   + A  LVL  +R L+G  R  F+  G A +   + R++ A+G+ +
Sbjct: 331 VMAGQPVPGGLRLQFRLARLLVLDNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPM 390

Query: 370 KLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIG-ENNEILVRGPMVMRGYYKLDK 428
              +GMTET    +        P SIG +    +V++  +  EILVRGP V  GY  L +
Sbjct: 391 LEVWGMTETCGASTGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPNVFMGYLNLPE 450

Query: 429 ETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIE 488
           +T E+ D  G+L TGD G +DE G   ITDR+K+++ T+GGK I P  +E  +    ++ 
Sbjct: 451 KTAETIDTDGWLHTGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELENELKFSPYVT 510

Query: 489 QIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKE 548
              VI D R +++ +I+   +++E+YA++ ++ + +   L +  +V  + +  ++ + K+
Sbjct: 511 DAVVIGDKRPYLTVIIMIDQENVEKYAQDNDVPFSNYASLTRSPEVQSLIQAEIDRVNKK 570

Query: 549 LAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
            A+ EQ+KKF LL    S +  ELTPT KL+RK++  +Y D+IE MY
Sbjct: 571 FARVEQIKKFFLLDTQLSAEDEELTPTMKLKRKLVQQKYADQIEAMY 617