Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECOR38

 Score =  111 bits (278), Expect = 7e-29
 Identities = 116/459 (25%), Positives = 191/459 (41%), Gaps = 75/459 (16%)

Query: 52  LLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVV 111
           +L +GI   D+IA        +T+   A L+I AV+VP+ P+    +  ++L     K+ 
Sbjct: 67  MLTKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMF 126

Query: 112 FVG----EQAQFDAALSQFEQCPELRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRAP 167
           F      +    D  L    Q P+L+ IV ++    L  A+ ++   + +A     D  P
Sbjct: 127 FAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDK---LAPATSSLSLSQIIA-----DNTP 178

Query: 168 LDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLP 227
           L   I   + D+L  +++TSGT G PKGVML + NI A    +  RLNLT +DV +   P
Sbjct: 179 LTTAIT-VHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAP 237

Query: 228 LSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVV 287
           L H       A     G T  +L      R  L ++     C                  
Sbjct: 238 LGH-------ATGFLHGVTAPFL---IGARSVLLDIFTPAAC------------------ 269

Query: 288 KAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFM 347
                                +   +Q++ + ML  +    D L L + +      + F+
Sbjct: 270 ---------------------LALLEQQRCTCMLGATPFVYDLLNLLEKQPADLSALRFL 308

Query: 348 PCGGAKLDETIGRFFHAIGINVKLGYGMTETT--ATVSCWDDHCFNPDSIGLSMPGAQVK 405
            CGG  + + + R     GI +   YG TE++  A V+  D       + G +  G ++K
Sbjct: 309 LCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLNDPLPRFMHTDGYAAAGVEIK 368

Query: 406 I----------GENNEILVRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLF 455
           +          G   E   RGP V  GY+   + T  + DE+G+  +GD   +DE G + 
Sbjct: 369 VVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIK 428

Query: 456 ITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIA 494
           IT R K+++   GG+ I+ + +E  + +   I    V+A
Sbjct: 429 ITGRKKDII-VRGGENISSREVEDILLQHPKIHDACVVA 466