Pairwise Alignments

Query, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., tRNA-modifying protein YgfZ from Variovorax sp. SCN45

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 30/308 (9%)

Query: 30  GAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVF-RLFHHHDGYAMFQ 88
           G I   G D  ++L GQ+T +   L        A C AKG+V + F  +    +   +  
Sbjct: 19  GVIRAEGPDAASFLHGQLTQDFSLLGAADARLAALCTAKGRVIASFIGIKPQAELILLVC 78

Query: 89  PQSAMEVELRELKKYAIFSKVTIAESSD--IALGVMGSQADAWIDTVSETTGDVRRIAGG 146
            +  +   L+ L  + + +KV + +++D     G+ G+      + +  +    +RI+ G
Sbjct: 79  SRDILAATLKRLSMFVLRAKVKLTDATDRFALYGLAGTALTG--NGLDASLPPGKRISVG 136

Query: 147 ---TAVRMSPQ----RWLLLVNAEQAEQYVNAWQGLHVEQSLWTRMDIEEAVPVVTQTAQ 199
              + V + P     R L +  A Q      A  G  ++ SLW   ++   +  +T    
Sbjct: 137 DDVSVVSLYPADGVPRALWIAPAGQP-----APVGPALDDSLWQWSEVRSGIVTLTTPVI 191

Query: 200 NEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVV 259
           +  +PQ +N ++V G++F KGCY GQE VAR+++RG  KR  Y+V+ +  AP+S  + V 
Sbjct: 192 DAFVPQMINYESVGGVNFKKGCYPGQEVVARSQFRGTLKRRAYLVQAD--APVSAGQEVF 249

Query: 260 ----LERAVGENWRSAGALLTHYRFTDSIAIGLIVLPNDLEHDVKLRLAAQPDTRWHIQP 315
                E+ VG   ++A A    +    S+ I  +   +       LR          ++P
Sbjct: 250 AANDAEQPVGTVAQAAPAPGGGWAALVSMQIAALEAGD-------LRAGTADGPALAVEP 302

Query: 316 LPYSLSDE 323
           LPY L ++
Sbjct: 303 LPYPLLED 310