Pairwise Alignments

Query, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 1e-34
 Identities = 98/300 (32%), Positives = 140/300 (46%), Gaps = 17/300 (5%)

Query: 30  GAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHHHDGYAMFQP 89
           G + + G+D   +LQGQ+TCN+  L ++  + GA C  KG++ S FR+    +GY +   
Sbjct: 14  GILAVRGSDAGKFLQGQLTCNINYLSQEHASLGARCMVKGRMQSSFRIVPEGNGYLLAMA 73

Query: 90  QSAMEVELRELKKYAIFSKVTIAESSD--IALGVMGSQA--DAWIDTVSETTGDVRRIAG 145
              ++ +L +LKKYA+FSK T+ + S      G+ G  A   A    V    G   R  G
Sbjct: 74  SELLDAQLADLKKYAVFSKATLTDESTAWARFGLQGGDAALQALGLVVPAAAGSTVRHDG 133

Query: 146 GTAVRMSPQRWLLLVNAEQAEQYVNAWQGLHVEQSL--WTRMDIEEAVPVVTQTAQNEHI 203
             A+ +S  R  L V    AE    A      E +L  W    I   +  V    +   I
Sbjct: 134 LIAIAVSAGRVELWVPVADAEPVRQALAAALPEGTLNDWLLGQIRAGIGQVMGPTRELFI 193

Query: 204 PQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMY---IVKGNLSAPLSQDEPVVL 260
           PQ +N+QAVDG+SF KGCYTGQE VAR +Y G  KR  Y   + +  + AP ++      
Sbjct: 194 PQMINLQAVDGVSFKKGCYTGQEIVARMQYLGKLKRRQYRLALDQQAIPAPGAEIFSPTH 253

Query: 261 ERAVGENWRSAGALLTHYRFTDSIAIGLIVLPNDLEHDVKLRLAAQPDTRWHIQPLPYSL 320
             +VGE   +AG          +    L VL  +   D  L L +    R  +  LPY L
Sbjct: 254 GSSVGEVVIAAG--------NGTGCELLAVLSAEAVEDGHLHLGSLEGPRLQVLTLPYEL 305