Pairwise Alignments

Query, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative global regulator (NCBI) from Escherichia coli BW25113

 Score =  215 bits (548), Expect = 1e-60
 Identities = 129/312 (41%), Positives = 179/312 (57%), Gaps = 14/312 (4%)

Query: 21  LMLTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLFHH 80
           L L  L  W   T+ GAD + Y+QGQVT +V  + E Q    AHCDAKGK+WS  RLF  
Sbjct: 19  LTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRD 78

Query: 81  HDGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSD-IALGVMGSQADAWI-DTVSETTG 138
            DG+A  + +S  E +L ELKKYA+FSKVTIA   + + LGV G QA A + +  SE   
Sbjct: 79  GDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPS 138

Query: 139 DVRRIA--GGTAV---RMSPQRWLLLVNAEQAEQYVNAWQG---LHVEQSLWTRMDIEEA 190
             +++   G T +       +R+L++ +   A    +  +G   L+  Q  W  ++IE  
Sbjct: 139 KEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQ-WLALNIEAG 197

Query: 191 VPVVTQTAQNEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSA 250
            PV+      + IPQA N+QA+ GISF KGCYTGQE VARAK+RG NKRA++++ G+ S 
Sbjct: 198 FPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASR 257

Query: 251 PLSQDEPVVLERAVGENWRSAGALLTHYRFTDSIAIGLIVLPNDLEHDVKLRLAAQPDTR 310
                E   LE  +GENWR  G +L   +  D   +  +V+ ND+E D   R+    +T 
Sbjct: 258 LPEAGED--LELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANT- 314

Query: 311 WHIQPLPYSLSD 322
            HI+PLPYSL +
Sbjct: 315 LHIEPLPYSLEE 326