Pairwise Alignments

Query, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., tRNA-modifying protein YgfZ from Alteromonas macleodii MIT1002

 Score =  133 bits (334), Expect = 7e-36
 Identities = 100/340 (29%), Positives = 159/340 (46%), Gaps = 30/340 (8%)

Query: 11  NLSSHDPLPELMLTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGK 70
           +++S   LP   +  L+    I+L G    +YLQGQ+T N+  L E      AHCD KGK
Sbjct: 3   SIASLQSLPSEFVVKLSNAMIISLEGEQADSYLQGQITVNINKLTENTARHFAHCDNKGK 62

Query: 71  VWSVFRLFHHHDGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSDI------------- 117
            WS   +  H +   +   + A    L +L KY +FSKV I + +               
Sbjct: 63  TWSTGYVTRHQNKLLLVTNEDAGSHSLAQLNKYGVFSKVDILDDTQTYSAYFISLDAVKT 122

Query: 118 -----ALGVMGSQ--ADAWIDTVSETTGDVRRIAGGTAV----RMSPQRWLLLVN---AE 163
                AL  + S+   +  +++ +   G + ++     V      S +  ++L++   A+
Sbjct: 123 NEVKAALSQLFSENEVERLLESDTPDNGSLEKVESEHGVAYFANTSCKGIIVLLDDNGAK 182

Query: 164 QAEQYVNAWQGLHVEQSLWTRMDIEEAVPVVTQTAQNEHIPQALNVQAVDGISFTKGCYT 223
           Q    + A       Q+++  + I+    +V   A  E++PQ +NVQA++GI F KGCY 
Sbjct: 183 QINSLIEAQTLSCYPQTVFDAIQIQSVHALVQGDAVAEYVPQMINVQALNGIDFDKGCYM 242

Query: 224 GQETVARAKYRGINKRAMYIVKGNLSAPLSQDEPVVLERAVGENWRSAGALLTHYRFTDS 283
           GQE VAR ++ G NKRA Y  K  L   ++      LE+ +GENWR AG +L +    D+
Sbjct: 243 GQEVVARTRFLGKNKRAAYSFK--LEGNVNIKPGDALEKQLGENWRIAGKIL-NVASLDN 299

Query: 284 IAIGLIVLPNDLEHDVKLRLAAQPDTRWHIQPLPYSLSDE 323
               + VL ND   +   RLA       +   LPYS+  +
Sbjct: 300 ETWFIAVLNNDTTSEDLHRLADNNAITCYPNTLPYSIEQK 339