Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 82.8 bits (203), Expect = 4e-21
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 12/179 (6%)

Query: 1   MNEQLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYR 60
           ++  +TD++L++R+  GD+ A  +L   Y  ++C  + R    +  + +V  + F  A++
Sbjct: 6   LDSDVTDRMLLQRMSGGDRAALGILYRSYHGRLCRFLGRLTRRADVIEEVINDCFWIAWQ 65

Query: 61  AIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPE 120
              +F G+S   TWL  IA  +    +      P   D   EE             S   
Sbjct: 66  KAGSFHGDSRVSTWLMGIAYRSGLKTLRQYGDAPVEDDPRREER------------SAVH 113

Query: 121 NITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAR 179
           ++   +EL+  +   +D L  D +  + L    G S +E+A +M CPVGTV++R+F AR
Sbjct: 114 DLDEDRELRDWLSKGLDRLSADQRVVIELVYGVGHSLDEVAVIMQCPVGTVKARLFHAR 172