Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 71.6 bits (174), Expect = 8e-18
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 4   QLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYRAIP 63
           Q++D  L+     G++ AF  LV R++NKV   I   V +S    D+ Q+AFIKA   + 
Sbjct: 6   QMSDSALVSLYIAGNESAFEQLVNRHKNKVYTTILMIVKDSYTAEDLMQDAFIKAIHTMK 65

Query: 64  --TFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPEN 121
              +  E  F +W+ RIA N A +H   + R P  +          +G +    +S  E+
Sbjct: 66  GGRYNEEGKFSSWICRIAHNLAIDHFRKEKRSPVIT--------LEDGSNVFNTMSFSED 117

Query: 122 ITLSKELKKTVF----DAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFR 177
              S ++K+       + I  LP   +  + +R    +S++EIA+     + T   R+  
Sbjct: 118 SAESLQIKEDTHARLRELIQTLPQSQREVLMMRHYADMSFQEIADATGVSINTALGRMRY 177

Query: 178 AREAVEKKI 186
           A   + KK+
Sbjct: 178 ALINLRKKM 186