Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  285 bits (728), Expect = 5e-82
 Identities = 139/190 (73%), Positives = 171/190 (90%), Gaps = 1/190 (0%)

Query: 1   MNEQLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYR 60
           M+EQLTDQVL+ERVQ GD++AFNLLV+RYQ+KV +L+SRYV  SGDV DV QE+FIKAYR
Sbjct: 1   MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVP-SGDVPDVVQESFIKAYR 59

Query: 61  AIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPE 120
           A+ +FRG+SAFYTWLYRIAVNTAKN++VAQ RRPP+SDVDA EAE +E G ALKE+SNPE
Sbjct: 60  ALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPE 119

Query: 121 NITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE 180
           N+ LS+EL++ VF  I++LP+DL+ A+TLRELDGLSYEEIA +MDCPVGTVRSRIFRARE
Sbjct: 120 NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRARE 179

Query: 181 AVEKKIKPLL 190
           A++ K++PL+
Sbjct: 180 AIDNKVQPLI 189