Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Erwinia tracheiphila SCR3

 Score =  281 bits (718), Expect = 7e-81
 Identities = 137/190 (72%), Positives = 167/190 (87%), Gaps = 1/190 (0%)

Query: 1   MNEQLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYR 60
           M+EQLTDQVL+ERVQ GD+++FNLLV+RYQ+KV +L+SRYV  SGDV D+ QE+FIKAYR
Sbjct: 1   MSEQLTDQVLVERVQKGDQKSFNLLVVRYQHKVASLVSRYVP-SGDVPDIVQESFIKAYR 59

Query: 61  AIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPE 120
           A+ +FRG+SAFYTWLYRIAVNTAKNH+VAQ RRPP SDVDA +AE +E    LKE+SNPE
Sbjct: 60  ALESFRGDSAFYTWLYRIAVNTAKNHLVAQGRRPPLSDVDAIDAENFESAGGLKEISNPE 119

Query: 121 NITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE 180
           N+ LS+ELK+ VF  I+ LP+DL+ A+TLRELDGLSYEEIA +MDCPVGTVRSRIFRARE
Sbjct: 120 NLMLSEELKQMVFRTIETLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRARE 179

Query: 181 AVEKKIKPLL 190
           A++ KI+PL+
Sbjct: 180 AIDSKIQPLI 189