Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., RNA polymerase sigma factor from Dickeya dianthicola ME23

 Score = 69.7 bits (169), Expect = 3e-17
 Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 19  KQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYRAIPTFRGESAFYTWLYRI 78
           +Q F L   R QN     I + VSN  DV D+ Q  +++  +    F G S   TW++ I
Sbjct: 24  EQVFRLHGKRLQN----FIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGI 79

Query: 79  AVNTAKNHI-VAQSRRPPASDVDAEEAEFYEGGDALKELSNPENITLSKELKKTVFDAID 137
           A+N  +NH   A+ R    SD   E AE       L    +P  IT           A  
Sbjct: 80  ALNLVRNHFKQARYRIVEISDDALEVAEI------LSTDIDPSRITECDHSLNRALAASA 133

Query: 138 ALPDDL-KTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAR 179
            LP++  K  M L + D +SY++IAE ++ P+GTVRSR+ RAR
Sbjct: 134 HLPEETRKMLMMLLDAD-VSYQDIAEQLNIPIGTVRSRLSRAR 175