Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Dickeya dadantii 3937

 Score =  285 bits (729), Expect = 3e-82
 Identities = 138/190 (72%), Positives = 170/190 (89%), Gaps = 1/190 (0%)

Query: 1   MNEQLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYR 60
           M+EQL DQVL+ERVQ GD++AFNLLV+RYQ+KV +L+SRYV  +GDV DVAQE+FIKAYR
Sbjct: 1   MSEQLADQVLVERVQKGDRKAFNLLVVRYQHKVASLVSRYVP-AGDVPDVAQESFIKAYR 59

Query: 61  AIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPE 120
           A+ +FRGESAFYTWLYRIAVNTAKN++VAQ RRPP+SDVDA +AE YE   ALKE+SNPE
Sbjct: 60  ALESFRGESAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYENASALKEISNPE 119

Query: 121 NITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE 180
           N+ LS+EL++ VF  I++LP+DL+ A+TLRELDGLSYEEIA +MDCPVGTVRSRIFRARE
Sbjct: 120 NLMLSEELRRIVFHTIESLPEDLRLAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRARE 179

Query: 181 AVEKKIKPLL 190
           A++ K++PL+
Sbjct: 180 AIDNKVQPLI 189