Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., sigma-70 family RNA polymerase sigma factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 67.4 bits (163), Expect = 1e-16
 Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 18/182 (9%)

Query: 7   DQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYRAIPTFR 66
           D  L  +   G ++ +  LV R+ + V  L+ R  +      DVAQ+AF++ ++    FR
Sbjct: 10  DVELAAQAAAGGRREYGELVRRHGSAVRGLLRRMGATPSLSDDVAQDAFLQGFQRCAEFR 69

Query: 67  GESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPENITLSK 126
           G+  F  W+ +IA       +  ++R    ++++A++A+       L +L          
Sbjct: 70  GQGTFAGWIKKIAARLYLKRVAKEARY--VAEIEADQADVVVDRGGLMDLD--------- 118

Query: 127 ELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAREAVEKKI 186
                  +A+  L +  +  ++L    G+S+ EIA  M+ P+GTV+S + R  + +  ++
Sbjct: 119 -------EALKTLSETERVCVSLCHGAGMSHPEIAAAMNLPLGTVKSHVKRGLDKLRARL 171

Query: 187 KP 188
           +P
Sbjct: 172 QP 173