Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., Sigma factor RpoE negative regulatory protein RseA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  158 bits (400), Expect = 6e-44
 Identities = 91/197 (46%), Positives = 123/197 (62%), Gaps = 18/197 (9%)

Query: 10  KEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALA 69
           KEKLSALMDGE +D+EL+  L  D + + TW++YHLI D +RG+ P    ++I+  V  A
Sbjct: 3   KEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAA 62

Query: 70  LENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAK-----RQLPAWLSQFGQVGIAACVSL 124
           +ENEP          V  +     EAQP PQQ +     +++  W +Q  Q+G+AACVSL
Sbjct: 63  IENEP----------VRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSL 112

Query: 125 AVIFGVQQYGGQS-SGVENELPVLQTIPLAGSAEPVSL--TRDSVEKHAPDSSMQEQRRR 181
           AVI GVQ Y GQS +  + E PV  T+P+ G A PVSL    ++    +    +QEQRRR
Sbjct: 113 AVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRR 172

Query: 182 VNALLQDYELQLRLNSE 198
           +NA+LQDYELQ RL+SE
Sbjct: 173 INAMLQDYELQRRLHSE 189