Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Negative regulator of sigma E activity from Kangiella aquimarina DSM 16071

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)

Query: 9   DKEKLSALMDGEMIDNELILGLAQDQDARDT-----WKNYHLIGDVLRGEAPIHKEWNIA 63
           DK+ +SA +D E   NEL    ++D  A ++     W  YHLIG V+R E   H + +IA
Sbjct: 16  DKQNVSAWVDNEKAGNELEAFASEDSFAIESEEMQLWSRYHLIGQVMRDEVK-HLDLDIA 74

Query: 64  ESVALALENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVS 123
             V   + NEP H+        +++ Q +      P    +Q+  +        IAA V+
Sbjct: 75  ARVNSEIANEPEHS--------VEVNQPKSNVISFPSNPFKQIAGY-------AIAASVA 119

Query: 124 LAVIFGVQQYGGQSSGVENELPVLQTI 150
           L V+F V    G  + +++++  + T+
Sbjct: 120 LVVLFNV----GNQNTLDSQVNPMATV 142