Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., Sigma-E factor negative regulatory protein from Alteromonas macleodii MIT1002

 Score = 98.6 bits (244), Expect = 7e-26
 Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 15/186 (8%)

Query: 10  KEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALA 69
           +EKLSA MDGE+  N++I  + QD+  +  W+ YH+    +R EA +  + +I  SVA A
Sbjct: 5   QEKLSAFMDGEIEGNDIIDAIKQDEALQAKWQRYHVYRGAMRKEASVAPQMDITASVAAA 64

Query: 70  LENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIFG 129
           LENEPA         ++  +++R ++ P        +  +  Q GQ  +AA V++AVIFG
Sbjct: 65  LENEPA---------IVAPKRSRWQSIP----LIGNVVPFAKQSGQFAVAASVAVAVIFG 111

Query: 130 VQQYGGQSSGVENELPVLQTIPLAGSAEPVSLTRDSVEKHAPDSSMQEQRRRVNALLQDY 189
           V QY  Q +  E       TI   G   PVSL +         + M E++R++NAL+ D+
Sbjct: 112 V-QYTNQEAPTE-PFMTAPTIAPQGGLSPVSLEQTRTLPRNDMNEMLEKKRKINALIADH 169

Query: 190 ELQLRL 195
           E Q++L
Sbjct: 170 EQQIKL 175