Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Sigma factor RpoE negative regulatory protein RseB precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  284 bits (727), Expect = 2e-81
 Identities = 146/311 (46%), Positives = 211/311 (67%), Gaps = 8/311 (2%)

Query: 5   LISALTLFCVNSTTAFAEEESAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQ 64
           L++A   F  N++     + ++ ALL QMN ASQ LNYELS++ + K  +E L YRHAR 
Sbjct: 10  LVAASLFFSANASA----DPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARL 65

Query: 65  DDQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIP-MLNTDVAELSR 123
           D + LA L+ L GP REV++RG+E+SY EPG+EPFT+ +G+ +  ++P ++ TD   L+ 
Sbjct: 66  DGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTL-NGDYIVDSLPSLIYTDFKRLAP 124

Query: 124 YYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYR 183
           YYDF+ VGR R A   C+V+RVV +DG RYSY+VW+D  + LP+R DLLDRDGE LEQ+R
Sbjct: 125 YYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFR 184

Query: 184 TISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMT 243
            I+F+VS+ +   M  L K  LP +L +P G   +  W  +WVP GF  +  +R  +   
Sbjct: 185 VIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTM 244

Query: 244 ERL-VESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPA 302
           + L +ES++YSDGLF+FSV V+ +   S   Q++R GRRT++S V+   EI++VG++PP 
Sbjct: 245 DNLPIESRLYSDGLFSFSVNVNRATQNS-SDQMLRTGRRTVYSSVRDNAEITIVGELPPQ 303

Query: 303 TAQRIAQSVMF 313
           TA+RIA S+ F
Sbjct: 304 TAKRIADSIKF 314