Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., sigma-E factor regulatory protein RseB from Dickeya dianthicola ME23

 Score =  240 bits (613), Expect = 3e-68
 Identities = 129/313 (41%), Positives = 192/313 (61%), Gaps = 1/313 (0%)

Query: 1   MKKLLISALTLFCVNSTTAFAEEESAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYR 60
           MK+   +A  L    S ++ A    + ALL QM+ AS+ LNYE+ YI V +  IE L YR
Sbjct: 1   MKRSWFAACILLGSLSYSSLAPASDSGALLQQMSSASRSLNYEIYYISVSRQGIESLRYR 60

Query: 61  HARQDDQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLNTDVAE 120
           H  Q+ + LA L++L GP REV++RG ++SY E   EPFT+   ++V     ++  +V  
Sbjct: 61  HTVQNGETLAELIHLDGPKREVMQRGSDISYFEADAEPFTLSGDHIVDSLPALIFANVER 120

Query: 121 LSRYYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLE 180
           LS YYDF+  GR R A     V+R+V +DG R+SY+V +D +S LPLR DLLD++G++LE
Sbjct: 121 LSAYYDFIPTGRIRLADRQGDVVRIVSRDGTRFSYIVCLDAESRLPLRVDLLDQNGDLLE 180

Query: 181 QYRTISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRM 240
           QYR IS +V +     M  ++KV  P +L +P  S     W   W+P G + +  ++  +
Sbjct: 181 QYRAISITVDKNAPLAMKPMDKVSQPPLLSIPTTSTVNFNWVTEWLPAGVEEVSHSQRPL 240

Query: 241 AMTERLVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIP 300
                LVES++YSDGLF+FSV +S     +   Q    GR+T+H+ V+   EI+V+G++P
Sbjct: 241 PGVTGLVESRLYSDGLFSFSVNISPVGE-THPDQNASLGRKTIHTEVRDNREITVIGELP 299

Query: 301 PATAQRIAQSVMF 313
            ATA+RIA +V+F
Sbjct: 300 LATAKRIADNVIF 312