Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Sigma-E factor regulatory protein RseB precursor from Alteromonas macleodii MIT1002

 Score =  172 bits (435), Expect = 2e-47
 Identities = 97/299 (32%), Positives = 173/299 (57%), Gaps = 4/299 (1%)

Query: 16  STTAFAEEESAEALLYQMNEASQHLNYELSYI--LVKKNSIEPLLYRHA-RQDDQQLAHL 72
           S +   E +SA   L ++     + N+++S++  +  K ++ P L+RH   +D  +L  L
Sbjct: 89  SASRTREPQSANQWLAELQNIITNANFQVSFVQTIAGKETV-PYLWRHGIMEDGSELEQL 147

Query: 73  VYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLNTDVAELSRYYDFVKVGR 132
              +GP RE+IR  D VS  EP V+P+++ S ++  P   +L     +L+  Y+FV VGR
Sbjct: 148 NLQNGPGRELIRVNDVVSVFEPDVQPYSLRSKHINGPIPSVLLYHPEQLAEAYEFVAVGR 207

Query: 133 AREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYRTISFSVSER 192
           AR AG + Q +R+V +D  R+ Y +W+DE S + L+ ++LD  G +LEQ +  +F++S  
Sbjct: 208 ARVAGRSAQQIRIVSRDNTRFGYQLWLDESSGMLLKLNMLDLQGALLEQIQVTAFAISPE 267

Query: 193 LAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTERLVESQMY 252
            A+  + +N   LP  + L     +   W VT++P G + ++ +  R+A+T ++VE +++
Sbjct: 268 PADYFSRINSASLPAPMALSNTPNRAHKWDVTYLPAGMREIKQDTRRLALTGQIVEYKLF 327

Query: 253 SDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQRIAQSV 311
           SDGL + SVYV  +++   +   +R    T  ++  G+ +++VVG+IP  TA  IA S+
Sbjct: 328 SDGLVDVSVYVQPAEDALGETLALRNEVSTFLTLTDGKAQVTVVGEIPLQTANAIATSL 386