Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., GTP-binding protein TypA from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 1e-40
 Identities = 150/556 (26%), Positives = 248/556 (44%), Gaps = 67/556 (12%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMA-EQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L++  G L   E+  E+V+DS D E+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            +++       Y +N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 62  AINWNG-----YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTGV-GVDE 171
            E  L  +  +NK+D P A P+ V ++I D+   + A +       V  SA  G+ G+D 
Sbjct: 117 FEAGLRPIVCINKVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDH 176

Query: 172 ---------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                    + + IV  +PAP  D D   Q  I    ++++LGV+ + RI  G +K N  
Sbjct: 177 TDMAEDMTPLYQSIVDNVPAPAVDRDGAFQMQISALDYNSFLGVIGVGRIARGRVKPNTP 236

Query: 223 -IKVMSTGQTWGVDRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
            + + + G+      L +     +    ++    G +VC I  +    + D  TL     
Sbjct: 237 VVAIGADGKKRNGRILKLMGHHGLHRIDVEEAAAGDIVC-ISGMDSLFISD--TLCHPDT 293

Query: 282 EKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEPETS 331
            +A+      +P V +  F V+   +           N ++ L K  L + +L  E   S
Sbjct: 294 VEAMKPLTVDEPTV-SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDS 352

Query: 332 AALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLP 391
           A     F+    G LH+ ++ E + RE   ++    P V+   +   K+           
Sbjct: 353 AD---KFKVSGRGELHLSVLIETMRRE-GFEMGVGRPEVIIRQVDGVKQ----------- 397

Query: 392 AINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
                    EP     I  P +  G V+     ++G   +MV  G  +V L Y+IP A  
Sbjct: 398 ---------EPFENVTIDTPEESQGKVMEEMGLRKGDLTNMVPDGKGRVRLEYNIP-ARG 447

Query: 451 VLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGDKVD---ALAIITHRDNSQTR 507
           ++ F ++  + + G   L   F R++      +    NG  V      A+    +  Q R
Sbjct: 448 LIGFRNQFLTLTNGAGILTSIFDRYDTMKSGDMSGRQNGVLVSVETGKALTYSLETLQAR 507

Query: 508 GRQLVEKMKEFIPRQM 523
           G+  VE  +E    Q+
Sbjct: 508 GKLFVEHGQEIYNGQI 523