Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., GTP-binding protein TypA/BipA from Variovorax sp. SCN45

 Score =  146 bits (369), Expect = 2e-39
 Identities = 136/513 (26%), Positives = 225/513 (43%), Gaps = 75/513 (14%)

Query: 2   KHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDRE-MAEQVLDSMDLERERGITIKAQSVT 60
           K IRN +IIAH+DHGK+T+ D+L++  G  +D E + + V+D+  +E+ERGITI A++  
Sbjct: 4   KQIRNIAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCA 63

Query: 61  LDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAI 120
           + +     Q   +N +DTPGH DF  EV R+L+  +G +L++DA +G   QT      A+
Sbjct: 64  VTW-----QGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKAL 118

Query: 121 EMDLEVVPILNKIDLPAAEPERVAEEIED---------------------IVGIDAIDAV 159
            + L+ + ++NK+D P A P++V     D                     I G  +++  
Sbjct: 119 ALGLKPILVVNKVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEG 178

Query: 160 RCSAKTGVGVDEVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKK 219
               + G  +  + + I+  +P+ +GDP APLQ  I    F  ++G + + RI  G+LK 
Sbjct: 179 APGEQWGPDMSALFDTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKP 238

Query: 220 NDKIKVMS--TGQTWGVDRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLA 277
              + VM    G++       + T + +D         G +V  I  I    +G T+T  
Sbjct: 239 MTDVVVMEGPDGKSIKGRVNQVLTFQGLDRVQATEAGPGEIVL-INGIADIGIGVTITDP 297

Query: 278 KNGCEKALPGFKKVKPQV-------------YAGLFPVSSDDYDNFRDALGKLSLNDASL 324
            N     LP  K  +P +               G F  S   +D  +    +L  N A  
Sbjct: 298 AN--PAPLPMLKVDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQK---ELQHNVALR 352

Query: 325 FYEPETSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYV 384
             E +        F     G LH+ I+ E + RE   ++  + P VV+  +   K     
Sbjct: 353 VNETDEEGI----FEVMGRGELHLTILLENMRRE-GYEMAVSKPRVVFRTVNGEK----- 402

Query: 385 DSPAKLPAINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTY 443
                           EPI      +   + G V+    E++G  V+M   G  +V L Y
Sbjct: 403 ---------------HEPIELVTADIEDQHQGGVMQALGERKGELVNMEPDGRGRVRLEY 447

Query: 444 DIPMAEVVLDFFDRLKSTSRGYASLDYGFQRFE 476
            IP A  ++ F +   + +RG   +   F  +E
Sbjct: 448 RIP-ARGLIGFTNEFLNLTRGSGLISNIFDSYE 479