Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., ribosome associated GTPase from Pseudomonas putida KT2440

 Score =  167 bits (423), Expect = 1e-45
 Identities = 154/563 (27%), Positives = 257/563 (45%), Gaps = 75/563 (13%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMA-EQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L++  G L   E+  E+V+DS D E+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            +++       Y +N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 62  AINWNG-----YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTGV-GVDE 171
            E  L+ + ++NK+D P A P+ V ++I D+   + A D       V  SA  G+ G+D 
Sbjct: 117 FEAGLKPIVVINKVDRPGARPDWVLDQIFDLFDNLGATDEQLDFKVVYASALNGIAGLDH 176

Query: 172 ---------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                    + + IV  +PAP  D D P Q  I    ++++LGV+ + RI  G +K N  
Sbjct: 177 TAMAEDMTPLYQSIVDNVPAPSVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTP 236

Query: 223 IKVMSTGQTWGVDR----LGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAK 278
           +  + T       R    +G     +VD +    G++   + G  ++    + DTL  A 
Sbjct: 237 VVAIDTNGKKRNGRILKLMGHHGLHRVDVEEAQAGDI-VCISGFDELF---ISDTL-CAP 291

Query: 279 NGCEKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEP 328
           +  E   P    V     +  F V+   +           N +D L K  L + +L  + 
Sbjct: 292 DAVEAMKP--LTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVQE 349

Query: 329 ETSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPA 388
             S      F+    G LH+ ++ E + RE   ++    P V+                 
Sbjct: 350 TDSPD---KFKVSGRGELHLSVLIETMRRE-GFEMAVGRPEVI----------------- 388

Query: 389 KLPAINDIEEIR-EPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIP 446
               I +++ ++ EP     I +P +  G V+     ++G   +MV  G  +V L Y+IP
Sbjct: 389 ----IREVDGVKQEPFENVTIDIPEESQGKVMEEMGLRKGDLTNMVPDGKGRVRLEYNIP 444

Query: 447 MAEVVLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGDKVD---ALAIITHRDN 503
            A  ++ F ++  + + G   L   F R++     ++   LNG  V      A+    + 
Sbjct: 445 -ARGLIGFRNQFLTLTNGAGILTSIFDRYDTMKSGQMSGRLNGVLVSVETGKALTYSLET 503

Query: 504 SQTRGRQLVEKMKEFIPRQMFDI 526
            Q RG+  VE  +E    Q+  +
Sbjct: 504 LQARGKLFVEHGQEIYNGQIIGL 526