Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., GTP-binding protein TypA/BipA from Pseudomonas sp. DMC3

 Score =  157 bits (398), Expect = 9e-43
 Identities = 154/559 (27%), Positives = 251/559 (44%), Gaps = 73/559 (13%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMA-EQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L++  G L   E+  E+V+DS D E+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            +++       Y +N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 62  AINWNG-----YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTGV-GVDE 171
            E  L  + ++NK+D P A P+ V ++I D+   + A +       V  SA  G+ G+D 
Sbjct: 117 FEAGLRPIVVINKVDRPGARPDWVLDQIFDLFDNLGATEEQLDFQVVYASALNGIAGLDH 176

Query: 172 ---------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                    + + +V  +P P  D D P Q  I    ++++LGV+ + RI  G +K N  
Sbjct: 177 TAMAEDMTPLYQAVVDHVPPPAVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTP 236

Query: 223 IKVMST-GQTWGVDRLGIFTPKQVDTDSLDTGEVGWVVC--GIKDIMGAPVGDTLTLAKN 279
           +  +S  G+      L +     +    +D    G +VC  G  ++    + DTL    N
Sbjct: 237 VVAISADGKRRNGRILKLMGHHGLHRIDVDEAAAGDIVCISGFDELF---ISDTL-CDIN 292

Query: 280 GCEKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEPE 329
             E   P    V     +  F V+   +           N +D L K  L + +L  E  
Sbjct: 293 TVEAMKP--LTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVEEG 350

Query: 330 TSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAK 389
            SA     F+    G LH+ ++ E + RE   +L    P V+                  
Sbjct: 351 DSAD---KFKVSGRGELHLSVLIETMRRE-GFELALGRPEVI------------------ 388

Query: 390 LPAINDIEEIR-EPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPM 447
              I +++ ++ EP     I +P +  G V+     ++G   +MV  G  +V L Y+IP 
Sbjct: 389 ---IREVDGVKQEPFENVTIDIPEESQGKVMEEMGLRKGDLSNMVPDGKGRVRLEYNIP- 444

Query: 448 AEVVLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGDKVD---ALAIITHRDNS 504
           A  ++ F ++  + + G   L   F R+       +    NG  V      A+    +  
Sbjct: 445 ARGLIGFRNQFLTLTNGAGILTSIFDRYAPVKSGHMSGRQNGVLVSVETGKALTYSLETL 504

Query: 505 QTRGRQLVEKMKEFIPRQM 523
           Q RG+  VE  +E    Q+
Sbjct: 505 QARGKLFVEHGQEIYNGQI 523