Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ribosome-dependent GTPase TypA from Erwinia amylovora T8

 Score =  171 bits (434), Expect = 6e-47
 Identities = 148/513 (28%), Positives = 250/513 (48%), Gaps = 78/513 (15%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDR-EMAEQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L+Q  G    R E  E+V+DS DLE+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            + +       Y++N +DTPGH DF  EV R ++  +  LLVVDA  G   QT      A
Sbjct: 62  AIKWN-----DYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDI-VGIDAID------AVRCSAKTGV-GVDE 171
               L+ + ++NK+D P A P+ V +++ D+ V +DA D       +  SA  G+ G+D 
Sbjct: 117 FANGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDH 176

Query: 172 ---------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                    + E IV  +  PQ + +AP Q  I    ++NY+GV+ + RIK G +K N +
Sbjct: 177 SDMAEDMTPLYEAIVKHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQ 236

Query: 223 IKVM-STGQTWG------VDRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLT 275
           I ++ S G+T        +  LG+   +++D    + G++   + G+ ++    + DT+ 
Sbjct: 237 ITIIDSEGKTRNGKVGKVLTHLGL---ERIDATEAEAGDI-IAITGLGEL---NISDTIC 289

Query: 276 LAKNGCEKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASL- 324
             +N   +ALP     +P V    F V++  +              D L K  +++ +L 
Sbjct: 290 DPQN--VEALPALSVDEPTV-TMYFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALR 346

Query: 325 FYEPETSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYV 384
             E E S A    FR    G LH+ ++ E + RE   ++  + P V+      N++I   
Sbjct: 347 VEETEDSDA----FRVSGRGELHLSVLIENMRRE-GFEIAVSRPKVI------NRKI--- 392

Query: 385 DSPAKLPAINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTY 443
                         ++EP     + +   + G+V+    E++G   DM+  G  ++ L Y
Sbjct: 393 -----------DGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDVKDMIPDGKGRIRLDY 441

Query: 444 DIPMAEVVLDFFDRLKSTSRGYASLDYGFQRFE 476
            IP A  ++ F     + + G   L   F  ++
Sbjct: 442 LIP-ARGLIGFRTEFMTMTSGTGLLYSTFSHYD 473