Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ribosome-dependent GTPase TypA from Erwinia tracheiphila SCR3

 Score =  166 bits (419), Expect = 3e-45
 Identities = 138/506 (27%), Positives = 234/506 (46%), Gaps = 64/506 (12%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDR-EMAEQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L+Q  G    R E  E+V+DS DLE+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAETTERVMDSNDLEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            + +     + Y++N +DTPGH DF  EV R ++  +  LLVVDA  G   QT      A
Sbjct: 62  AIKW-----KDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDI-VGIDAID------AVRCSAKTGVG---- 168
               L  + ++NK+D P A P+ V +++ D+ V +DA D       +  SA  G+     
Sbjct: 117 FANGLRPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDDQLDFPVIYASALNGIAGLEH 176

Query: 169 ------VDEVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                 +  + E IV  +  PQ +  AP Q  I    ++NY+GV+ + RIK G +K N +
Sbjct: 177 TDMAEDMTPLYEAIVKHVSPPQVEAAAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQ 236

Query: 223 IKVMSTGQTWGVDRLG-IFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
           + ++ +       ++G + T   ++       E G ++  I  +    + DT+   +N  
Sbjct: 237 VTIVDSEGKIRNGKVGKVLTHLGLERIDATEAEAGDII-AITGLGELNISDTICDPQN-- 293

Query: 282 EKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEPETS 331
            +ALP     +P V    F V++  +              D L K  +++ +L  E    
Sbjct: 294 VQALPALSVDEPTV-TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETAD 352

Query: 332 AALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLP 391
           A     FR    G LH+ ++ E + RE   +L  + P V++   +  K+           
Sbjct: 353 AD---AFRVSGRGELHLSVLIENMRRE-GFELAVSRPKVIFREFEGRKQ----------- 397

Query: 392 AINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
                    EP     + +   + G V+    E++    +M   G  +V L Y IP +  
Sbjct: 398 ---------EPFENVTLDIEEQHQGAVMQAMGERKADMKNMNPDGKGRVRLDYVIP-SRG 447

Query: 451 VLDFFDRLKSTSRGYASLDYGFQRFE 476
           ++ F +   + + G   L   F  ++
Sbjct: 448 LIGFRNEFMTMTSGTGLLYSTFSHYD 473