Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ribosome-dependent GTPase TypA from Escherichia coli ECRC62

 Score =  176 bits (447), Expect = 2e-48
 Identities = 143/479 (29%), Positives = 234/479 (48%), Gaps = 69/479 (14%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDR-EMAEQVLDSMDLERERGITIKAQSV 59
           ++ +RN +IIAH+DHGK+TL D+L+Q  G    R E  E+V+DS DLE+ERGITI A++ 
Sbjct: 2   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            + +       Y++N +DTPGH DF  EV R ++  +  LLVVDA  G   QT      A
Sbjct: 62  AIKWN-----DYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDI-VGIDAID------AVRCSAKTGV-GVDE 171
               L+ + ++NK+D P A P+ V +++ D+ V +DA D       V  SA  G+ G+D 
Sbjct: 117 FAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDH 176

Query: 172 ---------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                    + + IV  +PAP  D D P Q  I    +++Y+GV+ + RIK G +K N +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236

Query: 223 IKVM-STGQTWGV---DRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAK 278
           + ++ S G+T        LG    ++++TD  + G++   + G+ ++    + DT+   +
Sbjct: 237 VTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDI-VAITGLGEL---NISDTVCDTQ 292

Query: 279 NGCEKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEP 328
           N   +ALP     +P V +  F V++  +              D L K  +++ +L  E 
Sbjct: 293 N--VEALPALSVDEPTV-SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEE 349

Query: 329 ETSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPA 388
              A     FR    G LH+ ++ E + RE   +L  + P V++  +   K+        
Sbjct: 350 TEDAD---AFRVSGRGELHLSVLIENMRRE-GFELAVSRPKVIFREIDGRKQ-------- 397

Query: 389 KLPAINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIP 446
                       EP     + V   + G+V+    E++G   +M   G  +V L Y IP
Sbjct: 398 ------------EPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIP 444