Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., GTPase Der from Xanthobacter sp. DMC5

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 8/197 (4%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           +AIVGRPNVGKSTL N L+G+K+++   +P  TR R  G    G+     VDT GL    
Sbjct: 5   LAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGEGRLGDLTFRIVDTAGLEEAT 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKL-QKANFPVVLCVNKVDQV 152
             ++   M     +++ D + +LF+++        +  F  L +KA  PV+L  NK  + 
Sbjct: 65  PASLEGRMRAQTEAAIGDCDAILFMIDARIGLTPTDRAFADLVRKAGKPVILVANK-SEG 123

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPK--AVHHFPEEYVTD 210
           +      L    L       D +P+SA+ G+    L   + D LP+   +    EE   D
Sbjct: 124 RGGEAGTLEAFGLG----LGDPIPLSAEHGEGLSDLYDAICDALPEQTRLEEENEEEEDD 179

Query: 211 RSQRFMASEIVREKLMR 227
             +  +  E+  EK  R
Sbjct: 180 ADEVPVEGEVEPEKPRR 196



 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 12/164 (7%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGL---- 89
           VA++GRPN GKSTL+N LLG+   +T  +   TR  I    T         DT GL    
Sbjct: 200 VAVLGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSISVNVTYAGIPLELFDTAGLRKRS 259

Query: 90  HIEEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFTKLQKANFPVVLCVNK 148
            I++K  + +L    A  ++    +V+ +++ T  +   D  +   + +    +V+  NK
Sbjct: 260 RIDDK--LEKLSAADALRAMKFAEVVVILIDATRPFEEQDLRIADLVAREGRALVIGYNK 317

Query: 149 VDQVKDRNEVMLHMLE----LSKRMQFVDIVPISAKQGKNTDVL 188
            D V  R  +   + E    L  +++ V IVP+S   G   D L
Sbjct: 318 ADLV-PRGGLATRLREEIDHLLPQVKGVPIVPLSGLMGHGLDKL 360