Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., GTP-binding protein from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 7/213 (3%)

Query: 2   ADQEFDIDAYFASQSEGKSVVASTPENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSR 61
           A++E   +   A   E K +    P  +    +AI+GRPNVGKSTL+N +LG+   I   
Sbjct: 167 AEEEEGEEEIVAEGEEAKRIPG--PSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYD 224

Query: 62  KPQTTRHRIMGVETDGNYQAIYVDTPGLHIEEK--RAINRLMNRAASSSLSDVNLVLFVV 119
           +P TTR  I         +   +DT G+    K    + +        ++ D N+V+FV+
Sbjct: 225 QPGTTRDSIYIPFERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVM 284

Query: 120 EGTHWTADDEM-VFTKLQKANFPVVLCVNKVDQV--KDRNEVMLHMLELSKRMQFVDIVP 176
           +      D ++ +     +A   +V+ +NK D +   +R+ V + +      ++F DI  
Sbjct: 285 DAREGVVDHDLNLLGFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHF 344

Query: 177 ISAKQGKNTDVLKKHVRDHLPKAVHHFPEEYVT 209
           ISA  G     L   V++    AV  +P   +T
Sbjct: 345 ISALHGTGVGNLYASVQNSFKSAVTRWPTNRLT 377



 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           +A+VGRPNVGKSTL N L   + +I       TR R  G         I VDT G+  +E
Sbjct: 5   IALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGISGDE 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFPVVLCVNKVDQV 152
              ++  M   +  ++ + ++VLF+V+    +TA D+M+   L+K N    +  NK+D +
Sbjct: 65  -HGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANKIDNI 123

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPK 198
               +  L   E S  M   D +PI+   G+    + +      PK
Sbjct: 124 ----DPELARAEFSP-MGLGDAIPIAGAHGRGITQMLEIALSSFPK 164