Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., putative GTP-binding factor (VIMSS) from Escherichia coli BW25113

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 3   DQEFDIDAYFASQSEGKSVVASTPENQHCGF-VAIVGRPNVGKSTLLNNLLGQKISITSR 61
           D++ +  A F ++  G+       + Q     +AIVGRPNVGKSTL N +LG++  +   
Sbjct: 173 DEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 232

Query: 62  KPQTTRHRI-MGVETDGNYQAIYVDTPGLHIEEK--RAINRLMNRAASSSLSDVNLVLFV 118
            P TTR  I + +E DG  + + +DT G+    K   A+ +        ++ D N+V+ V
Sbjct: 233 MPGTTRDSIYIPMERDGR-EYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLV 291

Query: 119 VEGTHWTADDEM-VFTKLQKANFPVVLCVNKVDQVKDRNEVMLHMLE-LSKRMQFVDIVP 176
           ++     +D ++ +   +  +   +V+ VNK D +    EV   + E L  R+ F+D   
Sbjct: 292 IDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--QEVKEQVKETLDFRLGFIDFAR 349

Query: 177 ---ISAKQGKNTDVLKKHVRD 194
              ISA  G     L + VR+
Sbjct: 350 VHFISALHGSGVGNLFESVRE 370



 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           VA+VGRPNVGKSTL N L   + ++ +  P  TR R  G       + I +DT G+   E
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTE 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFPVVLCVNKVDQV 152
                R+  ++   ++ + ++VLF+V+        DE +   L+    P  L  NK D +
Sbjct: 65  DGVETRMAEQSL-LAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGL 123

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPKAVHHFPEEYVTDRS 212
            D ++ ++    L       +I PI+A  G+    L +HV   LP      P+E V + +
Sbjct: 124 -DPDQAVVDFYSLG----LGEIYPIAASHGRGVLSLLEHVL--LPWMEDLAPQEEVDEDA 176

Query: 213 Q 213
           +
Sbjct: 177 E 177