Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  106 bits (264), Expect = 2e-27
 Identities = 86/254 (33%), Positives = 124/254 (48%), Gaps = 20/254 (7%)

Query: 158 LIQFLVTFIALIWIVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAEDHHNEIGLVAKSIN 217
           ++Q     +A++ IV   +G  +T L + L       DR           E+ L    + 
Sbjct: 267 ILQQRAPAVAMVLIV---IGLIMTWLLRPLLRAADQADRMT-------RGELALTPLRVV 316

Query: 218 EFIDASHQALLRERELRQQIERWESYYRTIAEQDTLTGLKNRL----GCEKFVLRKQRAS 273
              +  H      R L +  +  E+  R +A  DTLTGL NR       ++ ++R +R S
Sbjct: 317 RNDEIGHLTQAFNRLLAKLHDNQEALAR-LAHHDTLTGLPNRKLLDDRLQQALVRARRHS 375

Query: 274 TTMVLLLIDLDGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIY 333
             + +L +DLDGFK +NDTLGH AGD+ LREIA R  AL +       V R+GGDEF + 
Sbjct: 376 HRVAVLYLDLDGFKTLNDTLGHEAGDQALREIAHRLQALVR---QTDTVARIGGDEFVLL 432

Query: 334 IPLDEFVAE-SIERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQAD 392
               E  AE S    A + IE+ ++P+ + Q    +G SIGI+  N      + LL  AD
Sbjct: 433 AADFEDPAEQSALALARRCIEAIAQPLQVAQSKTVIGASIGIALGNGGETP-QDLLAAAD 491

Query: 393 KAMYWVKYRGKHGY 406
           KAMY  K  G+  Y
Sbjct: 492 KAMYRAKQNGRGSY 505