Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 7e-27
 Identities = 107/390 (27%), Positives = 181/390 (46%), Gaps = 40/390 (10%)

Query: 38  IQSVEQQKQELEE----KLALSLSNSAAIALYVNNYDIASEVMDALLLHQEINAVKLASV 93
           +  + Q++ +++E    KL  S  N++  A ++NN  +A +V   L+L   I  V++   
Sbjct: 35  LSDLHQEQSKVQEHYNFKLVQSYENASQAAYHLNNL-LAEQVATTLMLDPGIFKVEIVDD 93

Query: 94  DGIVFERTTIPSTYKEQ------NYWSDANRY---RLDSPVDGNLIGYLMIHEDHQVIRQ 144
            G V  R     + + Q      +Y + A       L  P    ++G L  + D   I +
Sbjct: 94  FGDVMTRKEKAISEQSQLVSVLASYLTPAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAK 153

Query: 145 QAINQILDQIAVVLIQ-FLVTFIALIWIVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAE 203
             I +    +   L++  L+T I L++  ++L  +P+T L   ++ +  D  R       
Sbjct: 154 VFIAKTTRVLLFDLLRNTLLTTILLLFFYQKL-SRPITMLITWVNSLN-DTQRSPLPLRL 211

Query: 204 DHHNEIGLVAKSINEFIDASHQALLRERELRQQIERWESYYRTIAEQDTLTGLKNR-LGC 262
            H +E+  +A +         Q++ + +EL       ES    +A  D+LTGL NR L  
Sbjct: 212 THDDELSELASTF--------QSMWKGKELA------ESKLNQLAYYDSLTGLANRSLLL 257

Query: 263 EKF---VLRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSD 319
           +K    +   Q + +T VL  +DLD FK +ND+LGH  GD++++ +A R  A  +   +D
Sbjct: 258 QKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTK---ND 314

Query: 320 FVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNS 379
           ++  R+GGDEFA+ IP         E  A QL+   S P  +         SIGIS   S
Sbjct: 315 YLSARIGGDEFAVLIPY--LSPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPS 372

Query: 380 LHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
           +      +L QAD A+Y  K  G++ +  Y
Sbjct: 373 VGSCNIDVLRQADTALYRAKASGRNKFMFY 402