Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  104 bits (260), Expect = 7e-27
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 24/284 (8%)

Query: 130 IGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIALIWIVRRLVGKPLTDLSQALSE 189
           +G L +      +R + + Q      V+   FL+    L+  VR LV  PLT L  +L  
Sbjct: 133 VGRLEVAFHDGKVRSELVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTGPLTRLRNSLHH 192

Query: 190 VRPDHDRKVAVAAEDHHNEIGLVAKSINEFIDASHQALLRERELRQQIERWESYYRTIAE 249
                 R+  V +    +E+G V  + N+ +    Q   R  ++ Q           +A 
Sbjct: 193 NASVLMREPLVWSS--RDELGEVVHAYNQLLTEIDQ---RTEDIHQ-----------LAN 236

Query: 250 QDTLTGLKNRLGCEK----FVLRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLREI 305
           +D LTGL NR   E      +    R + ++ LL  D+D FK VNDTLGH  GD +LR I
Sbjct: 237 RDLLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRII 296

Query: 306 AKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLGQQS 365
           A R + + +       V R GGDEF I +       E+    A +LIE+   P+ LG   
Sbjct: 297 ADRIHDIMR---GMDTVARWGGDEFVIVVESLNSAGEAAS-VAEKLIETIGVPVQLGSNL 352

Query: 366 AQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
            +VG S+GIS       D+  L+  AD A++  K RG++ +H +
Sbjct: 353 LRVGVSVGISMYPQDGADITTLIKNADMALFEAKGRGRNTFHFF 396