Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 98.2 bits (243), Expect = 6e-25
 Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 16/183 (8%)

Query: 228 LRERELRQQIERWESYYRTIAEQDTLTGLKNRLGCEKFVL----RKQRASTTMVLLLIDL 283
           + ER+ R+   RW+      AE D LTGL NR+  E  +     + ++  + + +L I L
Sbjct: 383 IAERKRRETRMRWQ------AEHDALTGLANRVHFETALAVALSQARQTGSELAVLFISL 436

Query: 284 DGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAES 343
           +GFK+V DTLG A GD VL  +AKR   L Q   +D VV RLGGDEFA+ IP+ +   E 
Sbjct: 437 EGFKEVADTLGRAIGDPVLSVMAKR---LRQIVRADDVVARLGGDEFAVIIPMLQH--EG 491

Query: 344 IERF-AAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRG 402
             RF A +++   +EP+ LG   AQ+  ++G++         ++LL  AD A+   K  G
Sbjct: 492 NARFVAGKIVSCLAEPVILGNTQAQISANVGVAIHPHHGTSPKELLSAADHAIRCSKQAG 551

Query: 403 KHG 405
           + G
Sbjct: 552 RSG 554